STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN44698.1His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (606 aa)    
Predicted Functional Partners:
AMN41998.1
LuxR family transcriptional regulator.
 
 0.814
AMN44691.1
LuxR family two component transcriptional regulator.
 
 0.814
AMN45010.1
Two-component nitrogen fixation transcriptional regulator FixJ.
 
 0.805
AMN41997.1
Two-component response regulator.
 
 
 0.798
AMN39527.1
LuxR family two component transcriptional regulator.
 
 0.796
AMN44374.1
Two component transcriptional regulator, LuxR family.
 
 0.778
AMN40459.1
Two-component chemotaxis response transcriptional regulator cheY.
 
 
 0.776
AMN40715.1
Two-component response regulator.
 
 
 
 0.769
AMN43340.1
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.760
AMN44690.1
Two component response regulator.
 
 
 0.760
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.