STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN44748.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
AMN44865.1
2'-deoxycytidine 5'-triphosphate deaminase.
 
     0.799
AMN40982.1
Metal dependent phosphohydrolase.
  
     0.761
AMN45428.1
Sensory transduction histidine kinase.
  
     0.759
hisS
histidyl-tRNA synthetase.
  
     0.746
AMN45429.1
Two component Fis family transcriptional regulator.
  
     0.734
AMN38951.1
Hypothetical protein.
  
     0.724
AMN45048.1
Sensor signal transduction histidine kinase.
  
     0.717
AMN44293.1
Hypothetical protein.
  
     0.713
AMN44746.1
Hypothetical protein; Belongs to the UPF0262 family.
 
     0.708
AMN44776.1
Ribosomal-protein-S5p-alanine acetyltransferase.
  
     0.692
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.