STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN45103.1Flp/Fap pilin protein. (55 aa)    
Predicted Functional Partners:
AMN45112.1
Flp pilus assembly protein, ATPase CpaE.
 
  
 0.900
AMN45109.1
Flp pilus assembly CpaB.
 
  
 0.880
AMN45108.1
Flp pilus assembly protein, protease CpaA.
 
  
 0.847
AMN45100.1
Flp pilus assembly protein TadG.
 
  
 0.844
AMN45101.1
TadE family protein.
 
  
 0.827
AMN45115.1
Flp pilus assembly protein TadC.
 
  
 0.796
AMN45114.1
Flp pilus assembly protein TadB.
 
  
 0.770
AMN43704.1
Flp pilus assembly protein CpaB.
 
  
 0.757
AMN38860.1
Flp pilus assembly protein RcpC/CpaB.
 
  
 0.750
AMN45102.1
Hypothetical protein.
 
  
 0.746
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.