STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN45399.1Hypothetical protein; Belongs to the UPF0311 family. (152 aa)    
Predicted Functional Partners:
AMN45401.1
feruloyl-CoA synthase.
 
   
 0.691
AMN42557.1
Flavoprotein monooxygenase.
 
     0.632
AMN45400.1
enoyl-CoA hydratase/isomerase family protein.
 
 
   0.626
AMN45397.1
ABC transporter substrate binding protein.
       0.542
AMN45398.1
ABC transporter substrate binding protein.
       0.542
AMN45396.1
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.509
AMN45402.1
3-hydroxyacyl-CoA dehydrogenase (short-chain); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.497
AMN43411.1
Monooxygenase FAD-binding protein.
 
     0.492
AMN41388.1
Monooxygenase FAD-binding.
 
     0.465
AMN42284.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
 
     0.445
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.