STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN45410.1TRAP dicarboxylate family transporter subunit DctQ. (188 aa)    
Predicted Functional Partners:
AMN45409.1
TRAP dicarboxylate family transporter subunit DctP.
 
 
 0.992
AMN45411.1
TRAP dicarboxylate family transporter subunit DctM.
 
 0.989
AMN45475.1
LVIVD repeat-containing protein.
  
     0.724
AMN43663.1
MetA-pathway phenol degradation-like protein.
  
     0.707
AMN43673.1
MetA-pathway phenol degradation-like protein.
  
     0.695
AMN42871.1
Alpha/beta family hydrolase.
  
     0.617
AMN45403.1
4-hydroxybenzoyl-CoA thioesterase.
 
     0.585
AMN42710.1
Hypothetical protein.
  
     0.560
AMN42651.1
Hypothetical protein.
  
     0.530
AMN40950.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.525
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.