M2YKU5_DOTSN protein (Dothistroma septosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2YKU5_DOTSN

Uncharacterized protein; Belongs to the GST superfamily. (271 aa)

Predicted Functional Partners:

N1PYS6_DOTSN

0.718

tef1a

0.655

stcT

0.616

N1PXA3_DOTSN

0.616

N1Q4B1_DOTSN

0.594

M2XKM5_DOTSN

0.592

N1Q421_DOTSN

0.592

N1PBK3_DOTSN

0.590

N1PYP9_DOTSN

0.590

N1Q0E3_DOTSN

0.574

Your Current Organism:

Dothistroma septosporum

NCBI taxonomy Id: 675120
Other names: D. septosporum NZE10, Dothistroma septosporum NZE10, Mycosphaerella pini NZE10

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2XKM5_DOTSN	M2YKU5_DOTSN	M2XKM5	M2YKU5	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.592
M2XKM5_DOTSN	N1PXA3_DOTSN	M2XKM5	N1PXA3	Uncharacterized protein.	Uncharacterized protein.	0.445
M2XKM5_DOTSN	N1Q0E3_DOTSN	M2XKM5	N1Q0E3	Uncharacterized protein.	Fumarylacetoacetase.	0.763
M2XKM5_DOTSN	stcT	M2XKM5	M2XI00	Uncharacterized protein.	Translation elongation factor-like protein; Belongs to the GST superfamily.	0.445
M2YKU5_DOTSN	M2XKM5_DOTSN	M2YKU5	M2XKM5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.592
M2YKU5_DOTSN	N1PBK3_DOTSN	M2YKU5	N1PBK3	Uncharacterized protein; Belongs to the GST superfamily.	RPOLD domain-containing protein.	0.590
M2YKU5_DOTSN	N1PXA3_DOTSN	M2YKU5	N1PXA3	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.616
M2YKU5_DOTSN	N1PYP9_DOTSN	M2YKU5	N1PYP9	Uncharacterized protein; Belongs to the GST superfamily.	RPOLD domain-containing protein.	0.590
M2YKU5_DOTSN	N1PYS6_DOTSN	M2YKU5	N1PYS6	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.	0.718
M2YKU5_DOTSN	N1Q0E3_DOTSN	M2YKU5	N1Q0E3	Uncharacterized protein; Belongs to the GST superfamily.	Fumarylacetoacetase.	0.574
M2YKU5_DOTSN	N1Q421_DOTSN	M2YKU5	N1Q421	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.592
M2YKU5_DOTSN	N1Q4B1_DOTSN	M2YKU5	N1Q4B1	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.594
M2YKU5_DOTSN	stcT	M2YKU5	M2XI00	Uncharacterized protein; Belongs to the GST superfamily.	Translation elongation factor-like protein; Belongs to the GST superfamily.	0.616
M2YKU5_DOTSN	tef1a	M2YKU5	N1Q4H9	Uncharacterized protein; Belongs to the GST superfamily.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.655
N1PBK3_DOTSN	M2YKU5_DOTSN	N1PBK3	M2YKU5	RPOLD domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.590
N1PBK3_DOTSN	N1PXA3_DOTSN	N1PBK3	N1PXA3	RPOLD domain-containing protein.	Uncharacterized protein.	0.654
N1PBK3_DOTSN	N1PYP9_DOTSN	N1PBK3	N1PYP9	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.791
N1PBK3_DOTSN	N1Q4B1_DOTSN	N1PBK3	N1Q4B1	RPOLD domain-containing protein.	Uncharacterized protein.	0.710
N1PBK3_DOTSN	stcT	N1PBK3	M2XI00	RPOLD domain-containing protein.	Translation elongation factor-like protein; Belongs to the GST superfamily.	0.654
N1PXA3_DOTSN	M2XKM5_DOTSN	N1PXA3	M2XKM5	Uncharacterized protein.	Uncharacterized protein.	0.445