N1PPF0_DOTSN protein (Dothistroma septosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N1PPF0_DOTSN

FCP1 homology domain-containing protein. (566 aa)

Predicted Functional Partners:

N1PFK6_DOTSN

0.921

N1PUH3_DOTSN

0.862

N1PT91_DOTSN

0.814

N1Q4X0_DOTSN

0.778

N1Q3M9_DOTSN

0.773

N1Q1S7_DOTSN

0.771

N1PN00_DOTSN

0.753

N1Q181_DOTSN

0.744

M2YL11_DOTSN

0.742

N1PMF9_DOTSN

0.740

Your Current Organism:

Dothistroma septosporum

NCBI taxonomy Id: 675120
Other names: D. septosporum NZE10, Dothistroma septosporum NZE10, Mycosphaerella pini NZE10

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2YL11_DOTSN	N1PFK6_DOTSN	M2YL11	N1PFK6	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.978
M2YL11_DOTSN	N1PMF9_DOTSN	M2YL11	N1PMF9	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
M2YL11_DOTSN	N1PPF0_DOTSN	M2YL11	N1PPF0	RNA_pol_L_2 domain-containing protein.	FCP1 homology domain-containing protein.	0.742
M2YL11_DOTSN	N1Q181_DOTSN	M2YL11	N1Q181	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
M2YL11_DOTSN	N1Q3M9_DOTSN	M2YL11	N1Q3M9	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.987
M2YL11_DOTSN	N1Q4X0_DOTSN	M2YL11	N1Q4X0	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.999
N1PFK6_DOTSN	M2YL11_DOTSN	N1PFK6	M2YL11	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.978
N1PFK6_DOTSN	N1PMF9_DOTSN	N1PFK6	N1PMF9	Uncharacterized protein.	Uncharacterized protein.	0.989
N1PFK6_DOTSN	N1PPF0_DOTSN	N1PFK6	N1PPF0	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.921
N1PFK6_DOTSN	N1Q181_DOTSN	N1PFK6	N1Q181	Uncharacterized protein.	Uncharacterized protein.	0.978
N1PFK6_DOTSN	N1Q3M9_DOTSN	N1PFK6	N1Q3M9	Uncharacterized protein.	Uncharacterized protein.	0.999
N1PFK6_DOTSN	N1Q4X0_DOTSN	N1PFK6	N1Q4X0	Uncharacterized protein.	RPOL4c domain-containing protein.	0.984
N1PMF9_DOTSN	M2YL11_DOTSN	N1PMF9	M2YL11	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
N1PMF9_DOTSN	N1PFK6_DOTSN	N1PMF9	N1PFK6	Uncharacterized protein.	Uncharacterized protein.	0.989
N1PMF9_DOTSN	N1PPF0_DOTSN	N1PMF9	N1PPF0	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.740
N1PMF9_DOTSN	N1Q181_DOTSN	N1PMF9	N1Q181	Uncharacterized protein.	Uncharacterized protein.	0.999
N1PMF9_DOTSN	N1Q3M9_DOTSN	N1PMF9	N1Q3M9	Uncharacterized protein.	Uncharacterized protein.	0.997
N1PMF9_DOTSN	N1Q4X0_DOTSN	N1PMF9	N1Q4X0	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
N1PN00_DOTSN	N1PPF0_DOTSN	N1PN00	N1PPF0	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.753
N1PN00_DOTSN	N1PT91_DOTSN	N1PN00	N1PT91	Uncharacterized protein.	Uncharacterized protein.	0.989