N1Q4D9_DOTSN protein (Dothistroma septosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N1Q4D9_DOTSN

Oxidored_FMN domain-containing protein. (448 aa)

Predicted Functional Partners:

N1Q117_DOTSN

0.474

N1PSD3_DOTSN

0.463

N1PP80_DOTSN

0.441

N1PIZ5_DOTSN

0.418

N1PVL4_DOTSN

0.416

M2WK03_DOTSN

0.410

N1PYD3_DOTSN

0.403

Your Current Organism:

Dothistroma septosporum

NCBI taxonomy Id: 675120
Other names: D. septosporum NZE10, Dothistroma septosporum NZE10, Mycosphaerella pini NZE10

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2WK03_DOTSN	N1PP80_DOTSN	M2WK03	N1PP80	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	Uncharacterized protein.	0.758
M2WK03_DOTSN	N1PSD3_DOTSN	M2WK03	N1PSD3	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	ETF domain-containing protein.	0.621
M2WK03_DOTSN	N1PVL4_DOTSN	M2WK03	N1PVL4	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.428
M2WK03_DOTSN	N1Q117_DOTSN	M2WK03	N1Q117	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	ETF domain-containing protein.	0.747
M2WK03_DOTSN	N1Q4D9_DOTSN	M2WK03	N1Q4D9	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	Oxidored_FMN domain-containing protein.	0.410
N1PIZ5_DOTSN	N1Q4D9_DOTSN	N1PIZ5	N1Q4D9	Uncharacterized protein.	Oxidored_FMN domain-containing protein.	0.418
N1PP80_DOTSN	M2WK03_DOTSN	N1PP80	M2WK03	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.758
N1PP80_DOTSN	N1Q4D9_DOTSN	N1PP80	N1Q4D9	Uncharacterized protein.	Oxidored_FMN domain-containing protein.	0.441
N1PSD3_DOTSN	M2WK03_DOTSN	N1PSD3	M2WK03	ETF domain-containing protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.621
N1PSD3_DOTSN	N1PVL4_DOTSN	N1PSD3	N1PVL4	ETF domain-containing protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.938
N1PSD3_DOTSN	N1Q117_DOTSN	N1PSD3	N1Q117	ETF domain-containing protein.	ETF domain-containing protein.	0.999
N1PSD3_DOTSN	N1Q4D9_DOTSN	N1PSD3	N1Q4D9	ETF domain-containing protein.	Oxidored_FMN domain-containing protein.	0.463
N1PVL4_DOTSN	M2WK03_DOTSN	N1PVL4	M2WK03	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.428
N1PVL4_DOTSN	N1PSD3_DOTSN	N1PVL4	N1PSD3	NADPH:adrenodoxin oxidoreductase, mitochondrial.	ETF domain-containing protein.	0.938
N1PVL4_DOTSN	N1PYD3_DOTSN	N1PVL4	N1PYD3	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Glutamine amidotransferase type-2 domain-containing protein.	0.999
N1PVL4_DOTSN	N1Q117_DOTSN	N1PVL4	N1Q117	NADPH:adrenodoxin oxidoreductase, mitochondrial.	ETF domain-containing protein.	0.787
N1PVL4_DOTSN	N1Q4D9_DOTSN	N1PVL4	N1Q4D9	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Oxidored_FMN domain-containing protein.	0.416
N1PYD3_DOTSN	N1PVL4_DOTSN	N1PYD3	N1PVL4	Glutamine amidotransferase type-2 domain-containing protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.999
N1PYD3_DOTSN	N1Q4D9_DOTSN	N1PYD3	N1Q4D9	Glutamine amidotransferase type-2 domain-containing protein.	Oxidored_FMN domain-containing protein.	0.403
N1Q117_DOTSN	M2WK03_DOTSN	N1Q117	M2WK03	ETF domain-containing protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.747