STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N1Q5F7_DOTSNUncharacterized protein. (329 aa)    
Predicted Functional Partners:
N1PFP6_DOTSN
Uncharacterized protein.
    
 0.643
M2YJB1_DOTSN
G-patch domain-containing protein.
    
 0.538
M2YJM9_DOTSN
ENDO3c domain-containing protein.
     
 0.538
N1PCF4_DOTSN
Uncharacterized protein.
    
 0.538
N1PRT4_DOTSN
G-patch domain-containing protein.
    
 0.538
N1PWR2_DOTSN
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 
 0.473
N1PNL0_DOTSN
LsmAD domain-containing protein.
    
 
 0.424
N1PN54_DOTSN
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.423
N1PW79_DOTSN
Glycoside hydrolase family 16 protein.
    
 
 0.423
N1PYY5_DOTSN
PUM-HD domain-containing protein.
    
 
 0.418
Your Current Organism:
Dothistroma septosporum
NCBI taxonomy Id: 675120
Other names: D. septosporum NZE10, Dothistroma septosporum NZE10, Mycosphaerella pini NZE10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.