STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQU24_11485Unannotated protein. (275 aa)    
Predicted Functional Partners:
soxZ
Unannotated protein.
 
 
 0.992
soxB
Unannotated protein; Belongs to the 5'-nucleotidase family.
 
 
 0.973
EQU24_13355
Unannotated protein.
 
  
 0.945
soxA
Unannotated protein.
 
  
 0.943
soxC
Unannotated protein.
 
  
 0.940
soxX
Unannotated protein.
 
  
 0.932
soxY
Unannotated protein.
  
  
 
0.917
EQU24_07265
Unannotated protein.
     
 0.911
cysN
Unannotated protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.907
cysD
Unannotated protein.
     
 0.905
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.