STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQU24_10000Unannotated protein. (299 aa)    
Predicted Functional Partners:
rpsR
Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
  
  
 0.903
rplI
Unannotated protein; Binds to the 23S rRNA.
  
  
 0.882
rpsF
Unannotated protein; Binds together with S18 to 16S ribosomal RNA.
  
    0.848
EQU24_13235
Unannotated protein.
  
     0.659
EQU24_09030
Unannotated protein.
  
     0.648
EQU24_17935
Unannotated protein.
  
     0.596
EQU24_00550
Unannotated protein.
  
     0.590
EQU24_03500
Unannotated protein.
  
     0.575
EQU24_00750
Unannotated protein.
  
     0.568
EQU24_12665
Unannotated protein.
  
     0.555
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.