STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQU24_08335Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)    
Predicted Functional Partners:
EQU24_06975
Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.995
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.991
EQU24_06980
Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.990
sdhD
Unannotated protein.
  
 
 0.982
sdhC
Unannotated protein.
  
 
 0.978
fumC
Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.972
gltA
Unannotated protein; Belongs to the citrate synthase family.
  
 
 0.969
EQU24_06010
Unannotated protein; Belongs to the citrate synthase family.
  
 
 0.969
EQU24_04695
Unannotated protein.
 
 
 0.957
EQU24_21320
Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  
 0.957
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.