Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EQU24_05620 | EQU24_05625 | GCA_000341735_01887 | GCA_000341735_01886 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.404 |
EQU24_05620 | gltX | GCA_000341735_01887 | GCA_000341735_01885 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.476 |
EQU24_05625 | EQU24_05620 | GCA_000341735_01886 | GCA_000341735_01887 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.404 |
EQU24_05625 | EQU24_15525 | GCA_000341735_01886 | GCA_000341735_04346 | Unannotated protein. | Unannotated protein. | 0.481 |
EQU24_05625 | EQU24_17465 | GCA_000341735_01886 | GCA_000341735_03957 | Unannotated protein. | Unannotated protein. | 0.754 |
EQU24_05625 | flgC | GCA_000341735_01886 | GCA_000341735_04083 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.496 |
EQU24_05625 | gltX | GCA_000341735_01886 | GCA_000341735_01885 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.825 |
EQU24_15525 | EQU24_05625 | GCA_000341735_04346 | GCA_000341735_01886 | Unannotated protein. | Unannotated protein. | 0.481 |
EQU24_17465 | EQU24_05625 | GCA_000341735_03957 | GCA_000341735_01886 | Unannotated protein. | Unannotated protein. | 0.754 |
flgC | EQU24_05625 | GCA_000341735_04083 | GCA_000341735_01886 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.496 |
gltX | EQU24_05620 | GCA_000341735_01885 | GCA_000341735_01887 | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.476 |
gltX | EQU24_05625 | GCA_000341735_01885 | GCA_000341735_01886 | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Unannotated protein. | 0.825 |