Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EQU24_01615 | EQU24_10690 | GCA_000341735_02680 | GCA_000341735_00897 | Unannotated protein. | Unannotated protein. | 0.610 |
EQU24_01615 | ftsH | GCA_000341735_02680 | GCA_000341735_01134 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.617 |
EQU24_01615 | ftsH-2 | GCA_000341735_02680 | GCA_000341735_02640 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.617 |
EQU24_01615 | hflB | GCA_000341735_02680 | GCA_000341735_03038 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.617 |
EQU24_01615 | hflC-2 | GCA_000341735_02680 | GCA_000341735_03039 | Unannotated protein. | Unannotated protein; HflC and HflK could regulate a protease. | 0.656 |
EQU24_10690 | EQU24_01615 | GCA_000341735_00897 | GCA_000341735_02680 | Unannotated protein. | Unannotated protein. | 0.610 |
EQU24_10690 | hflC-2 | GCA_000341735_00897 | GCA_000341735_03039 | Unannotated protein. | Unannotated protein; HflC and HflK could regulate a protease. | 0.610 |
EQU24_10690 | hflK | GCA_000341735_00897 | GCA_000341735_00010 | Unannotated protein. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.610 |
EQU24_10690 | hflK-2 | GCA_000341735_00897 | GCA_000341735_03040 | Unannotated protein. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.610 |
EQU24_21930 | ftsH | GCA_000341735_03041 | GCA_000341735_01134 | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.546 |
EQU24_21930 | ftsH-2 | GCA_000341735_03041 | GCA_000341735_02640 | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.549 |
EQU24_21930 | hflB | GCA_000341735_03041 | GCA_000341735_03038 | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.757 |
EQU24_21930 | hflC-2 | GCA_000341735_03041 | GCA_000341735_03039 | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unannotated protein; HflC and HflK could regulate a protease. | 0.548 |
EQU24_21930 | hflK-2 | GCA_000341735_03041 | GCA_000341735_03040 | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.586 |
EQU24_21950 | hflB | GCA_000341735_03037 | GCA_000341735_03038 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.563 |
EQU24_21950 | hflC-2 | GCA_000341735_03037 | GCA_000341735_03039 | Unannotated protein. | Unannotated protein; HflC and HflK could regulate a protease. | 0.488 |
EQU24_21950 | hflK-2 | GCA_000341735_03037 | GCA_000341735_03040 | Unannotated protein. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.488 |
engB | hflC-2 | GCA_000341735_02513 | GCA_000341735_03039 | Unannotated protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | Unannotated protein; HflC and HflK could regulate a protease. | 0.481 |
ftsH | EQU24_01615 | GCA_000341735_01134 | GCA_000341735_02680 | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Unannotated protein. | 0.617 |
ftsH | EQU24_21930 | GCA_000341735_01134 | GCA_000341735_03041 | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.546 |
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