STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifAUnannotated protein. (508 aa)    
Predicted Functional Partners:
nifL
Unannotated protein.
 
 
 
 0.980
nifB
Unannotated protein.
 
   
 0.819
EQU24_03190
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.808
EQU24_17285
Unannotated protein.
     
 0.673
EQU24_19645
Unannotated protein.
   
 
 0.603
EQU24_07985
Unannotated protein.
   
 
 0.580
EQU24_21460
Unannotated protein.
   
 
 0.580
EQU24_07700
Unannotated protein.
   
 
 0.577
EQU24_07695
Unannotated protein.
   
 
 0.577
EQU24_09865
Unannotated protein.
   
 
 0.562
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.