STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpnHUnannotated protein. (389 aa)    
Predicted Functional Partners:
EQU24_15375
Unannotated protein.
 
   
 0.787
shc
Unannotated protein.
 
   
 0.782
shc-2
Unannotated protein.
 
   
 0.782
EQU24_13580
Unannotated protein.
 
   
 0.779
EQU24_08785
Unannotated protein.
 
   
 0.778
EQU24_15380
Unannotated protein.
 
   
 0.778
hpnR
Unannotated protein.
 
  
 0.763
EQU24_15355
Unannotated protein.
 
     0.581
EQU24_19165
Unannotated protein.
  
     0.533
ispH
Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
     
 0.498
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.