STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427385_02488Unannotated protein. (531 aa)    
Predicted Functional Partners:
GCA_000427385_03002
Unannotated protein.
 
  
  0.634
GCA_000427385_03824
Unannotated protein.
    
  0.584
GCA_000427385_04203
Unannotated protein.
    
  0.584
GCA_000427385_00339
Unannotated protein.
     
 0.544
GCA_000427385_01189
Unannotated protein.
     
 0.526
GCA_000427385_03179
Unannotated protein.
  
     0.519
GCA_000427385_02849
Unannotated protein.
  
  
  0.513
GCA_000427385_01267
Unannotated protein.
    
  0.496
GCA_000427385_03429
Unannotated protein.
  
     0.490
GCA_000427385_01713
Unannotated protein.
  
     0.450
Your Current Organism:
Methylocaldum szegediense
NCBI taxonomy Id: 675524
Other names: M. szegediense O-12, Methylocaldum sp. O-12, Methylocaldum szegediense O-12, Methylocaldum szegediense str. O-12, Methylocaldum szegediense strain O-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.