STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427385_02498Unannotated protein. (353 aa)    
Predicted Functional Partners:
GCA_000427385_02499
Unannotated protein.
 
  0.999
GCA_000427385_02497
Unannotated protein.
  
  0.989
GCA_000427385_03825
Unannotated protein.
 
  0.979
GCA_000427385_03834
Unannotated protein.
   
 
 0.896
GCA_000427385_02049
Unannotated protein.
   
 
  0.894
GCA_000427385_03548
Unannotated protein.
  
 
0.846
GCA_000427385_03904
Unannotated protein.
   
   0.810
GCA_000427385_04614
Unannotated protein.
    
 0.760
GCA_000427385_02048
Unannotated protein.
    
  0.752
GCA_000427385_03996
Unannotated protein.
    
  0.752
Your Current Organism:
Methylocaldum szegediense
NCBI taxonomy Id: 675524
Other names: M. szegediense O-12, Methylocaldum sp. O-12, Methylocaldum szegediense O-12, Methylocaldum szegediense str. O-12, Methylocaldum szegediense strain O-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.