STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0453Hypothetical protein. (35 aa)    
Predicted Functional Partners:
Psed_0452
UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands.
       0.773
Psed_0454
PFAM: Protein of unknown function DUF1416; KEGG: nfa:nfa5930 hypothetical protein.
       0.515
Psed_0455
Thiosulfate sulfurtransferase; PFAM: Rhodanese-like; KEGG: ami:Amir_6828 rhodanese domain protein; SMART: Rhodanese-like.
       0.515
Psed_0456
KEGG: svi:Svir_37700 hypothetical protein.
       0.515
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.