Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0804KEGG: stp:Strop_1985 hypothetical protein. (398 aa)    
Predicted Functional Partners:
Psed_1218
KEGG: fre:Franean1_2549 hypothetical protein.
 
     0.778
Psed_1215
KEGG: fre:Franean1_2547 hypothetical protein.
 
     0.774
Psed_1213
KEGG: fre:Franean1_2741 hypothetical protein.
 
     0.765
Psed_1214
KEGG: fre:Franean1_2742 hypothetical protein.
 
     0.734
Psed_1216
KEGG: fra:Francci3_1693 type IV secretory pathway VirB4 components-like protein.
 
     0.695
Psed_1759
AIG2 family protein; PFAM: AIG2-like; KEGG: sna:Snas_2545 hypothetical protein.
  
     0.689
Psed_1212
KEGG: fre:Franean1_2740 hypothetical protein.
 
     0.649
Psed_1209
PFAM: DNA methylase N-4/N-6; KEGG: cai:Caci_4087 putative RNA methylase.
 
     0.642
Psed_5532
KEGG: ami:Amir_0922 hypothetical protein.
  
     0.576
Psed_6618
KEGG: ami:Amir_6998 hypothetical protein.
  
     0.546
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.