STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0814PFAM: Toluene-4-monooxygenase system B; KEGG: fra:Francci3_0212 toluene-4-monooxygenase system B. (102 aa)    
Predicted Functional Partners:
Psed_0815
PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0211 methane/phenol/toluene hydroxylase.
   
   0.899
Psed_0812
PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0215 methane/phenol/toluene hydroxylase.
   
   0.896
Psed_0813
PFAM: Monooxygenase component MmoB/DmpM; KEGG: bbt:BBta_1595 toluene-4-monooxygenase system protein D.
   
   0.892
Psed_0768
KEGG: tcu:Tcur_0526 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS.
   
  0.843
Psed_0770
KEGG: tcu:Tcur_0524 phenol 2-monooxygenase; PFAM: Methane/phenol/toluene hydroxylase.
   
  0.839
Psed_0811
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region.
   
   0.832
Psed_0810
Ferredoxin--NAD(+) reductase; KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.775
Psed_0809
PFAM: Domain of unknown function DUF59; Ribosomal protein L22/L17; KEGG: svi:Svir_16180 predicted metal-sulfur cluster biosynthetic enzyme.
       0.698
Psed_0766
Phenol 2-monooxygenase; KEGG: tcu:Tcur_0530 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding.
    
  0.670
Psed_0767
PFAM: Phenol hydroxylase,conserved region; KEGG: tcu:Tcur_0527 phenol hydroxylase subunit P4.
     
  0.650
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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