STRINGSTRING
Psed_0948 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0948" - Hemolysin III family channel protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0948Hemolysin III family channel protein (227 aa)    
Predicted Functional Partners:
Psed_0949
UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (255 aa)
         
  0.765
Psed_4005
Carbamoyl-phosphate synthase L chain ATP-binding protein (1086 aa)
   
        0.490
Psed_5309
Serine/threonine protein kinase (473 aa)
   
    0.489
Psed_5286
Serine/threonine protein kinase (602 aa)
   
    0.489
Psed_5164
Serine/threonine protein kinase (476 aa)
   
    0.489
Psed_4235
Serine/threonine protein kinase (448 aa)
   
    0.489
Psed_3172
Serine/threonine protein kinase (603 aa)
   
    0.489
Psed_2779
Serine/threonine protein kinase with PASTA sensor(s) (585 aa)
   
    0.489
Psed_1900
Serine/threonine protein kinase (512 aa)
   
    0.489
Psed_0115
Serine/threonine protein kinase (880 aa)
   
    0.489
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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