Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_1002ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_2953 binding-protein-dependent transport systems inner membrane component. (310 aa)    
Predicted Functional Partners:
Psed_1001
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ols:Olsu_1266 extracellular solute-binding protein family 5.
 
 0.997
Psed_1003
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: gyc:GYMC61_1354 binding-protein-dependent transport systems inner membrane component.
 
 
 0.954
Psed_1004
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: sro:Sros_1953 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
 
  
 0.921
Psed_1352
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: fri:FraEuI1c_3097 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
 
 
 0.906
Psed_4092
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sro:Sros_5914 ABC transporter, permease protein.
 
 0.903
Psed_1353
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3096 binding-protein-dependent transport systems inner membrane component.
 
 
 0.902
Psed_1747
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01761 ABC peptide transporter, permease component.
 
 
 0.902
Psed_2188
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3739 binding-protein-dependent transport systems inner membrane component.
 
 
 0.902
Psed_2373
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3108 binding-protein-dependent transport systems inner membrane component.
 
 
 0.902
Psed_3694
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_00650 ABC transporter permease protein.
 
 
 0.902
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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