Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1016KEGG: sen:SACE_1021 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG. (195 aa)    
Predicted Functional Partners:
Psed_1015
Conserved hypothetical protein CHP00730; KEGG: sen:SACE_1020 lysine decarboxylase family protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; Belongs to the LOG family.
 
    
0.812
Psed_1018
PFAM: Glycosyl transferase, family 2; KEGG: svi:Svir_06330 putative glucosyl-3-phosphoglycerate synthase.
     
 0.800
Psed_1017
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.794
Psed_1021
TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: sen:SACE_1027 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase.
       0.784
Psed_1019
TIGRFAM: DivIVA domain; KEGG: sen:SACE_1026 hypothetical protein.
       0.777
Psed_1020
PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_1058 hypothetical protein.
       0.775
Psed_1014
TIGRFAM: Succinyl-diaminopimelate desuccinylase; KEGG: nml:Namu_4301 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
     
 0.604
Psed_1022
KEGG: mil:ML5_0910 hypothetical protein.
       0.498
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.475
Psed_5452
KEGG: rop:ROP_pROB01-04060 ribonucleotide-diphosphate reductase subunit beta.
  
    0.429
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.