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Psed_1027 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1027" - Type 11 methyltransferase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1027Type 11 methyltransferase (184 aa)    
Predicted Functional Partners:
Psed_1028
ECF subfamily RNA polymerase sigma-24 subunit (221 aa)
              0.667
Psed_1421
Fur family ferric uptake regulator (141 aa)
 
          0.515
Psed_1029
Hypothetical protein (236 aa)
              0.513
Psed_6243
Phosphoribulokinase/uridine kinase (315 aa)
   
        0.483
Psed_3588
DNA polymerase I (939 aa)
 
 
 
  0.421
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (887 aa)
         
  0.420
Psed_0280
alanyl-tRNA synthetase (463 aa)
         
  0.420
Psed_4651
Beta-lactamase domain-containing protein (594 aa)
              0.412
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (146 aa)
              0.412
Psed_3542
Holliday junction resolvase; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (149 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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