Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psed_0882 | Psed_1085 | Psed_0882 | Psed_1085 | Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.538 |
Psed_0946 | Psed_1085 | Psed_0946 | Psed_1085 | KEGG: sen:SACE_0923 hypothetical protein. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.502 |
Psed_1084 | Psed_1085 | Psed_1084 | Psed_1085 | KEGG: bld:BLi00801 hypothetical protein. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.556 |
Psed_1085 | Psed_0882 | Psed_1085 | Psed_0882 | KEGG: bmn:BMA10247_0522 hypothetical protein. | Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.538 |
Psed_1085 | Psed_0946 | Psed_1085 | Psed_0946 | KEGG: bmn:BMA10247_0522 hypothetical protein. | KEGG: sen:SACE_0923 hypothetical protein. | 0.502 |
Psed_1085 | Psed_1084 | Psed_1085 | Psed_1084 | KEGG: bmn:BMA10247_0522 hypothetical protein. | KEGG: bld:BLi00801 hypothetical protein. | 0.556 |
Psed_1085 | Psed_1086 | Psed_1085 | Psed_1086 | KEGG: bmn:BMA10247_0522 hypothetical protein. | TIGRFAM: Conserved hypothetical protein CHP02569; KEGG: ami:Amir_0834 aminoglycoside phosphotransferase. | 0.470 |
Psed_1085 | Psed_1724 | Psed_1085 | Psed_1724 | KEGG: bmn:BMA10247_0522 hypothetical protein. | PFAM: Protein of unknown function DUF2029; KEGG: rxy:Rxyl_2872 hypothetical protein. | 0.493 |
Psed_1085 | Psed_4881 | Psed_1085 | Psed_4881 | KEGG: bmn:BMA10247_0522 hypothetical protein. | KEGG: sen:SACE_0923 hypothetical protein. | 0.502 |
Psed_1085 | Psed_5390 | Psed_1085 | Psed_5390 | KEGG: bmn:BMA10247_0522 hypothetical protein. | PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tpr:Tpau_0863 peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | 0.488 |
Psed_1085 | Psed_5654 | Psed_1085 | Psed_5654 | KEGG: bmn:BMA10247_0522 hypothetical protein. | KEGG: ami:Amir_3551 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Belongs to the peptidase S8 family. | 0.488 |
Psed_1085 | acpP | Psed_1085 | Psed_2135 | KEGG: bmn:BMA10247_0522 hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.543 |
Psed_1086 | Psed_1085 | Psed_1086 | Psed_1085 | TIGRFAM: Conserved hypothetical protein CHP02569; KEGG: ami:Amir_0834 aminoglycoside phosphotransferase. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.470 |
Psed_1724 | Psed_1085 | Psed_1724 | Psed_1085 | PFAM: Protein of unknown function DUF2029; KEGG: rxy:Rxyl_2872 hypothetical protein. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.493 |
Psed_4881 | Psed_1085 | Psed_4881 | Psed_1085 | KEGG: sen:SACE_0923 hypothetical protein. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.502 |
Psed_5390 | Psed_1085 | Psed_5390 | Psed_1085 | PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tpr:Tpau_0863 peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.488 |
Psed_5654 | Psed_1085 | Psed_5654 | Psed_1085 | KEGG: ami:Amir_3551 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Belongs to the peptidase S8 family. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.488 |
acpP | Psed_1085 | Psed_2135 | Psed_1085 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | KEGG: bmn:BMA10247_0522 hypothetical protein. | 0.543 |