STRINGSTRING
Psed_1116 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1116" - Transcription factor WhiB in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1116Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (125 aa)    
Predicted Functional Partners:
Psed_6663
PadR-like family transcriptional regulator (193 aa)
   
          0.730
Psed_5604
Excisionase (72 aa)
   
          0.700
Psed_1117
Hypothetical protein (87 aa)
              0.697
Psed_5635
Xylose isomerase domain-containing protein (280 aa)
   
          0.691
Psed_0454
Hypothetical protein (99 aa)
   
          0.677
Psed_5155
Anti-sigma factor (114 aa)
   
          0.666
Psed_5709
Hypothetical protein (101 aa)
   
          0.652
Psed_4545
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown (132 aa)
   
          0.650
Psed_5240
GtrA family protein (171 aa)
   
          0.627
Psed_5274
AIG2 family protein (149 aa)
   
          0.623
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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