STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1333PFAM: Luciferase-like, subgroup; KEGG: swi:Swit_4272 luciferase family protein. (367 aa)    
Predicted Functional Partners:
Psed_2193
KEGG: fal:FRAAL2482 putative alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
  
  
 
0.928
Psed_2200
KEGG: fal:FRAAL3868 putative alkanesulfonate monooxygenase.
  
  
 
0.928
Psed_4517
KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup.
  
  
 
0.927
Psed_2975
PFAM: NADPH-dependent FMN reductase; KEGG: hla:Hlac_1047 NADPH-dependent FMN reductase.
  
  
  0.924
Psed_2623
PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_B2811 putative luciferase-like monooxygenase.
  
  
 
0.920
Psed_6479
PFAM: Luciferase-like, subgroup; KEGG: svi:Svir_26120 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
  
  
 
0.911
Psed_0811
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region.
   
 
  0.902
Psed_1157
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region.
   
 
  0.902
Psed_1440
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bts:Btus_2067 Rieske (2Fe-2S) iron-sulfur domain protein.
   
 
  0.902
Psed_6060
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fra:Francci3_0213 Rieske (2Fe-2S) protein.
   
 
  0.902
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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