STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpHAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; KEGG: cti:RALTA_B1696 fructose 1,6-bisphosphatase (RuBisCO operon); PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase. (357 aa)    
Predicted Functional Partners:
Psed_3406
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.946
Psed_3462
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, N-terminal; Transketolase, C-terminal; KEGG: fra:Francci3_1278 transketolase; SMART: Transketolase-like, pyrimidine-binding domain.
  
 
 0.946
Psed_6244
SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: bts:Btus_2647 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Belongs to the transketolase family.
  
 
 0.946
Psed_6523
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.946
Psed_6239
PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: afo:Afer_0177 fructose-bisphosphate aldolase.
  
 0.932
Psed_6242
PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: tkm:TK90_1149 fructose-bisphosphate aldolase.
  
 0.932
Psed_6248
KEGG: mes:Meso_3436 fructose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase, class-I.
  
 0.932
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.929
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.929
Psed_4872
Hypothetical protein; KEGG: cma:Cmaq_1259 fructose-bisphosphate aldolase.
    
 0.925
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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