STRINGSTRING
Psed_1531 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1531" - Anti-anti-sigma factor in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1531Anti-anti-sigma factor (150 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis (436 aa)
              0.859
Psed_1532
Selenocysteine-specific translation elongation factor (601 aa)
              0.859
Psed_0895
Hypothetical protein (145 aa)
   
          0.715
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (344 aa)
              0.651
Psed_1530
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (97 aa)
 
          0.640
Psed_1064
Hypothetical protein (178 aa)
   
          0.616
Psed_2038
Sporulation and cell division protein SsgA (139 aa)
   
          0.574
Psed_2710
ATP-binding protein (156 aa)
   
          0.556
Psed_5116
Hypothetical protein (56 aa)
   
          0.554
Psed_3321
RecB family exonuclease (371 aa)
   
          0.535
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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