STRINGSTRING
Psed_1547 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1547" - Pyruvate carboxylase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1547Pyruvate carboxylase (491 aa)    
Predicted Functional Partners:
Psed_1545
acetyl-CoA carboxylase, biotin carboxyl carrier protein (155 aa)
 
 
  0.971
Psed_1552
Pyruvate, phosphate dikinase (591 aa)
       
  0.948
Psed_1546
Biotin carboxylase (465 aa)
 
   
  0.930
Psed_2514
PEP-utilizing protein mobile subunit (590 aa)
 
   
  0.922
Psed_5549
2-oxoacid-acceptor oxidoreductase subunit alpha (647 aa)
       
  0.918
Psed_5550
2-oxoglutarate synthase (366 aa)
 
   
  0.918
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
       
  0.917
Psed_2085
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (430 aa)
       
  0.917
Psed_2944
Pyruvate, water dikinase (887 aa)
       
  0.912
Psed_4581
Pyruvate, phosphate dikinase (910 aa)
       
  0.910
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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