STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1631KEGG: rpb:RPB_2705 nitrile hydratase. (227 aa)    
Predicted Functional Partners:
Psed_1630
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: pva:Pvag_pPag20175 putative nitrile hydratase alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 0.997
Psed_1629
KEGG: gob:Gobs_2618 hypothetical protein.
 
   
 0.930
Psed_1451
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_1499
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: msp:Mspyr1_51780 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_3243
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_3917
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: rcu:RCOM_1892310 Nitrile hydratase subunit alpha, putative; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_5953
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_6005
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: mva:Mvan_0648 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
 
 
 
 0.918
Psed_6396
PFAM: Amidase; KEGG: rhi:NGR_b05700 indoleacetamide hydrolase.
    
  0.902
Psed_6277
KEGG: gob:Gobs_2618 hypothetical protein.
 
   
 0.788
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.