STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1744TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: fal:FRAAL4799 NtaA/SnaA/SoxA family monooxygenase. (456 aa)    
Predicted Functional Partners:
Psed_6479
PFAM: Luciferase-like, subgroup; KEGG: svi:Svir_26120 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
 
    0.766
Psed_2200
KEGG: fal:FRAAL3868 putative alkanesulfonate monooxygenase.
  
    0.751
Psed_2193
KEGG: fal:FRAAL2482 putative alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
  
    0.738
Psed_4517
KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup.
  
    0.730
Psed_1751
PFAM: Cupin 2, conserved barrel; KEGG: tcu:Tcur_1382 cupin 2 conserved barrel domain-containing protein.
 
     0.713
Psed_1746
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01762 ABC peptide transporter, permease component.
  
    0.686
Psed_1745
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: rop:ROP_14350 putative ABC transporter substrate-binding protein.
       0.681
Psed_1747
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01761 ABC peptide transporter, permease component.
       0.681
Psed_1749
Nickel-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fal:FRAAL4794 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
       0.680
Psed_1750
KEGG: fal:FRAAL3869 hypothetical protein.
       0.676
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.