Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1950KEGG: ami:Amir_4801 SNARE associated Golgi protein. (213 aa)    
Predicted Functional Partners:
Psed_1951
Hypothetical protein.
       0.594
Psed_2095
KEGG: nml:Namu_2358 hypothetical protein.
  
     0.552
Psed_1551
KEGG: rop:ROP_29730 hypothetical protein.
  
     0.507
Psed_5232
KEGG: kfl:Kfla_2092 hypothetical protein.
 
 
 
 0.504
Psed_1949
PFAM: CoA-transferase family III; KEGG: fri:FraEuI1c_2687 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.496
Psed_1948
PFAM: Protein of unknown function DUF1697; KEGG: cwo:Cwoe_4791 protein of unknown function DUF1697.
       0.458
Psed_1127
PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE.
 
   
 0.445
Psed_5615
PFAM: RDD; KEGG: sro:Sros_9150 membrane protein/domain-like protein.
  
    0.440
Psed_2021
PFAM: Uncharacterised protein family YphA; KEGG: sro:Sros_7264 membrane protein-like protein.
 
   
 0.422
Psed_0655
KEGG: ami:Amir_2134 hypothetical protein.
  
     0.420
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.