STRINGSTRING
Psed_1950 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1950" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1950Hypothetical protein (213 aa)    
Predicted Functional Partners:
Psed_1951
Hypothetical protein (85 aa)
              0.669
Psed_1949
L-carnitine dehydratase/bile acid-inducible protein F (399 aa)
              0.560
Psed_1446
Hypothetical protein (159 aa)
   
          0.559
Psed_1567
GtrA family protein (165 aa)
   
          0.557
Psed_3784
NAD(+) synthase (680 aa)
   
      0.534
Psed_1948
Hypothetical protein (179 aa)
              0.527
Psed_0882
Peptidase S41 (1122 aa)
 
          0.521
Psed_1777
Hypothetical protein (297 aa)
   
          0.492
Psed_1542
Hypothetical protein (786 aa)
   
          0.487
Psed_4506
Hypothetical protein (58 aa)
   
          0.470
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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