Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_1968KEGG: msm:MSMEG_2304 hypothetical protein. (44 aa)    
Predicted Functional Partners:
Psed_1967
PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_6732 integral membrane transporter.
       0.773
Psed_1966
Formyl-CoA transferase; KEGG: fal:FRAAL3412 putative alpha-methylacyl-CoA racemase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.521
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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