Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_1978Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: ami:Amir_1173 ABC transporter related; SMART: ATPase, AAA+ type, core. (307 aa)    
Predicted Functional Partners:
Psed_1979
PFAM: ABC-2 type transporter; KEGG: amd:AMED_6710 ABC transport system permease protein.
 
 
 0.992
Psed_1980
PFAM: ABC-2 type transporter; KEGG: amd:AMED_6709 ABC-2 type transporter.
 
 
 0.992
Psed_0845
PFAM: ABC-2 type transporter; KEGG: sen:SACE_0423 multidrug ABC transporter permease.
 
  
 0.577
Psed_3646
PFAM: ABC-2 type transporter; KEGG: amd:AMED_3028 ABC-2 type transporter.
 
  
 0.559
Psed_0585
PFAM: ABC-2 type transporter; KEGG: amd:AMED_5930 ABC-2 type transporter.
 
  
 0.522
Psed_1981
PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_2039 cupin 2 conserved barrel domain protein.
     
 0.521
Psed_0323
PFAM: ABC-2 type transporter; KEGG: aau:AAur_3042 putative ABC-type multidrug transport system, permease component.
 
  
 0.487
Psed_4617
PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_3543 ABC-2 type transporter.
 
  
 0.472
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
 0.443
Psed_0990
KEGG: sen:SACE_0994 putative ABC transporter integral membrane protein.
  
 
 0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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