Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_1996Regulatory protein ArsR; KEGG: cwo:Cwoe_3384 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (106 aa)    
Predicted Functional Partners:
Psed_1997
PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: amd:AMED_0950 hypothetical protein.
  
  
 0.790
Psed_3239
Regulatory protein ArsR; KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.734
Psed_5956
Transcriptional regulator, ArsR family; KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.645
Psed_6308
KEGG: hau:Haur_1072 activator of HSP90 ATPase 1 family protein; manually curated; PFAM: Activator of Hsp90 ATPase homologue 1-like.
 
  
 0.627
Psed_2409
KEGG: amd:AMED_0760 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.547
Psed_5877
Regulatory protein ArsR; SMART: HTH transcriptional regulator, ArsR; KEGG: fal:FRAAL3030 ArsR family transcriptional regulator.
  
     0.541
Psed_1998
KEGG: sgr:SGR_1198 hypothetical protein.
       0.524
Psed_0917
KEGG: svi:Svir_02010 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.523
Psed_1994
ATPase associated with various cellular activities AAA_5; KEGG: rha:RHA1_ro01299 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core.
  
    0.469
Psed_1995
PFAM: vWA containing CoxE-like; KEGG: rop:ROP_10200 hypothetical protein.
       0.462
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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