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Psed_2008 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2008" - degV family protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2008degV family protein (307 aa)    
Predicted Functional Partners:
Psed_4772
DAK2 domain fusion protein YloV (552 aa)
        0.947
Psed_2006
Phosphoglycerate mutase (208 aa)
   
        0.896
Psed_2007
Hypothetical protein (259 aa)
 
        0.885
rsfS
Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (140 aa)
   
        0.869
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (200 aa)
   
        0.709
Psed_2003
Alkylated DNA repair protein (205 aa)
              0.547
Psed_2002
TetR family transcriptional regulator (187 aa)
              0.491
Psed_4626
tRNA/rRNA methyltransferase SpoU; Could methylate the ribose at the nucleotide 34 wobble position in tRNA (167 aa)
 
          0.482
Psed_4771
ATP-dependent DNA helicase RecG (748 aa)
         
  0.446
rex
Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state (278 aa)
   
        0.445
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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