STRINGSTRING
Psed_2012 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2012" - DNA polymerase III subunit delta in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2012DNA polymerase III subunit delta (342 aa)    
Predicted Functional Partners:
Psed_0348
DNA polymerase III subunits gamma and tau (829 aa)
 
  0.996
Psed_6489
DNA polymerase III subunit delta’ (383 aa)
 
  0.996
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
 
  0.994
Psed_2831
DNA polymerase III subunit alpha (1185 aa)
     
  0.988
Psed_2761
DNA polymerase III subunit epsilon (586 aa)
     
  0.946
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1142 aa)
     
  0.943
Psed_2869
Pyruvate kinase (472 aa)
       
    0.905
dcd
Deoxycytidine triphosphate deaminase (193 aa)
     
 
    0.902
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (136 aa)
       
    0.901
Psed_4457
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (432 aa)
       
    0.900
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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