Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2091KEGG: nml:Namu_2347 hypothetical protein. (335 aa)    
Predicted Functional Partners:
Psed_2092
PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nml:Namu_2348 haloacid dehalogenase domain-containing protein hydrolase.
 
     0.951
Psed_2093
KEGG: nml:Namu_2349 protein tyrosine/serine phosphatase.
 
     0.851
Psed_2083
KEGG: nml:Namu_2339 putative PucR family transcriptional regulator; PFAM: GAF; SMART: GAF.
 
     0.830
Psed_2537
PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rop:ROP_29680 hypothetical protein.
  
     0.749
Psed_3936
KEGG: sna:Snas_4855 hypothetical protein.
  
     0.721
Psed_4722
Hypothetical protein; KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA.
  
     0.721
Psed_2095
KEGG: nml:Namu_2358 hypothetical protein.
  
     0.710
Psed_2946
KEGG: cai:Caci_5446 hypothetical protein.
  
     0.702
Psed_3156
PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: scb:SCAB_63591 hypothetical protein.
  
     0.642
Psed_1985
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: srt:Srot_2543 GCN5-related N-acetyltransferase.
  
     0.638
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.