STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2133KEGG: sen:SACE_1522 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Psed_6508
KEGG: ami:Amir_0254 hypothetical protein.
  
     0.774
Psed_0149
KEGG: amd:AMED_0129 hypothetical protein.
  
     0.773
Psed_5297
KEGG: ami:Amir_6447 hypothetical protein.
  
     0.772
Psed_6560
KEGG: amd:AMED_1188 hypothetical protein.
  
     0.772
Psed_5650
KEGG: ami:Amir_0482 hypothetical protein.
  
     0.771
Psed_0886
KEGG: ami:Amir_0666 hypothetical protein.
  
     0.769
Psed_2900
KEGG: svi:Svir_24050 hypothetical protein.
  
     0.769
Psed_6557
KEGG: svi:Svir_38140 hypothetical protein.
  
     0.768
Psed_0582
KEGG: amd:AMED_8800 hypothetical protein.
  
     0.767
Psed_6564
KEGG: amd:AMED_1184 hypothetical protein.
  
     0.767
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.