Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2159PFAM: Aryldialkylphosphatase; KEGG: rer:RER_52720 phosphatase. (355 aa)    
Predicted Functional Partners:
Psed_2163
PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein.
 
    0.808
Psed_2177
PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein.
 
    0.752
Psed_2160
PFAM: Domain of unknown function DUF861, cupin-3; KEGG: mkm:Mkms_0992 protein of unknown function DUF861, cupin_3.
       0.642
Psed_2158
KEGG: hch:HCH_06992 putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; Belongs to the NAPRTase family.
       0.553
Psed_2161
PFAM: Aldehyde dehydrogenase domain; KEGG: fri:FraEuI1c_2858 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.493
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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