Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2167PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase. (370 aa)    
Predicted Functional Partners:
Psed_4134
PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL4834 putative monooxygenase, FMN dependent.
  
     0.771
Psed_4220
PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase.
  
     0.720
Psed_1333
PFAM: Luciferase-like, subgroup; KEGG: swi:Swit_4272 luciferase family protein.
  
     0.588
Psed_2479
PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa32900 hypothetical protein.
  
     0.580
Psed_2170
KEGG: rha:RHA1_ro11047 oxidoreductase; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding.
 
  
 0.564
Psed_1350
KEGG: fre:Franean1_4505 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup.
  
  
 0.558
Psed_1823
KEGG: req:REQ_33170 fmn-dependent monooxygenase; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup.
  
  
 0.554
Psed_5898
PFAM: Luciferase-like, subgroup; KEGG: kfl:Kfla_6396 luciferase-like monooxygenase.
  
     0.544
Psed_2166
TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: cwo:Cwoe_5250 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase.
       0.533
Psed_2168
PFAM: Amidohydrolase 1; KEGG: aba:Acid345_1826 Pro-Hyp dipeptidase.
       0.518
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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