Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Psed_2175NADPH dehydrogenase; KEGG: ava:Ava_C0148 flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal. (330 aa)    
Predicted Functional Partners:
Psed_6449
PFAM: Monooxygenase, FAD-binding; KEGG: reu:Reut_B5482 monooxygenase, FAD-binding.
   
 0.847
Psed_5066
PFAM: Monooxygenase, FAD-binding; KEGG: cwo:Cwoe_2817 monooxygenase FAD-binding protein.
   
 0.831
Psed_6102
PFAM: Transcription factor CarD; KEGG: ami:Amir_0364 transcriptional regulator, CarD family.
  
    0.576
Psed_6338
PFAM: Monooxygenase, FAD-binding; KEGG: nfa:nfa21970 putative oxidoreductase.
   
 0.565
Psed_1771
KEGG: amd:AMED_1653 electron transfer flavoprotein beta subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
 
 0.548
Psed_2174
PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase.
  
  
 0.507
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.500
Psed_3872
RNA binding S1 domain protein; KEGG: sen:SACE_5431 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1.
   
  
 0.493
Psed_2173
PFAM: NIPSNAP; KEGG: bja:bll4801 hypothetical protein.
       0.485
Psed_4301
KEGG: gbr:Gbro_3700 nitrate reductase subunit beta; TIGRFAM: Nitrate reductase, beta subunit.
    
   0.443
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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