Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Psed_2191FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: mav:MAV_3809 dibenzothiophene desulfurization enzyme A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Alpha/beta hydrolase fold-1. (705 aa)    
Predicted Functional Partners:
Psed_2200
KEGG: fal:FRAAL3868 putative alkanesulfonate monooxygenase.
 
    0.741
rutA
Pyrimidine utilization protein A; Catalyzes the pyrimidine ring opening between N-3 and C-4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product which can be spontaneously reduced to ureidoacrylate.
 
    0.728
Psed_2193
KEGG: fal:FRAAL2482 putative alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
 
    0.718
Psed_4517
KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup.
 
    0.714
Psed_2189
KEGG: kra:Krad_0942 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
    0.629
Psed_2187
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3740 binding-protein-dependent transport systems inner membrane component.
       0.628
Psed_2188
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3739 binding-protein-dependent transport systems inner membrane component.
       0.628
Psed_2190
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mes:Meso_3737 extracellular solute-binding protein.
       0.628
Psed_4434
Putative F420-dependent oxidoreductase; KEGG: tcu:Tcur_2334 luciferase-like monooxygenase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup.
 
    0.411
Psed_4220
PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase.
 
    0.410
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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