Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2192PFAM: NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL4004 putative nucleoside-diphosphate-sugar epimerases. (207 aa)    
Predicted Functional Partners:
Psed_2193
KEGG: fal:FRAAL2482 putative alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
       0.560
Psed_2195
PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_8012 oxidoreductase protein.
       0.560
Psed_2194
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fre:Franean1_3756 acyl-CoA dehydrogenase type 2.
       0.551
Psed_1449
Acetolactate synthase; KEGG: rfr:Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Belongs to the TPP enzyme family.
  
    0.407
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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