Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2199Ketopantoate reductase ApbA/PanE domain protein; KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match); PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; Rhodanese-like; SMART: Rhodanese-like. (619 aa)    
Predicted Functional Partners:
Psed_1775
KEGG: amd:AMED_1660 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
 0.929
Psed_1840
KEGG: ami:Amir_5997 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
  
 
 0.923
Psed_2200
KEGG: fal:FRAAL3868 putative alkanesulfonate monooxygenase.
    
  0.918
Psed_4505
Sulfite reductase (ferredoxin); KEGG: amd:AMED_6656 ferredoxin-nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.910
Psed_4507
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.908
Psed_5465
KEGG: ami:Amir_6643 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII.
  
 
 0.907
Psed_6012
KEGG: rsa:RSal33209_0658 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII.
  
 
 0.907
Psed_1622
1-aminocyclopropane-1-carboxylate deaminase; KEGG: nca:Noca_4819 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
    
 0.906
Psed_0307
Cystathionine beta-lyase; KEGG: sen:SACE_3049 aminotransferase; PFAM: Aminotransferase, class I/classII.
    
 0.905
Psed_2433
PFAM: Uncharacterised protein family YphA; KEGG: sco:SCO0201 integral membrane protein SCJ1213c.
   
 
  0.903
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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