STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2225KEGG: rha:RHA1_ro08511 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal. (316 aa)    
Predicted Functional Partners:
Psed_2224
KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type.
 
 0.992
Psed_2272
KEGG: azc:AZC_1411 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type.
 
 0.969
Psed_4440
KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type.
 
 
 0.966
Psed_0665
KEGG: bmj:BMULJ_05466 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type.
 
 0.964
Psed_3024
Maleylacetate reductase; KEGG: vei:Veis_4611 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
 
 0.963
Psed_4439
KEGG: pap:PSPA7_3908 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type.
 
 0.963
Psed_4969
KEGG: amd:AMED_4854 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal.
  
  
 
0.910
Psed_6301
PFAM: Dienelactone hydrolase; KEGG: mjl:Mjls_2098 dienelactone hydrolase.
  
 
 0.909
Psed_0235
PFAM: Dienelactone hydrolase; KEGG: sen:SACE_0218 carboxymethylenebutenolidase.
  
 
 0.907
Psed_2280
KEGG: rpa:RPA2149 putative hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal.
  
  
 
0.907
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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