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Psed_2247 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2247" - 3-oxoacyl-ACP reductase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_22473-oxoacyl-ACP reductase (288 aa)    
Predicted Functional Partners:
Psed_2248
Hypothetical protein (121 aa)
 
          0.886
Psed_0540
3-oxoacyl-ACP reductase (265 aa)
 
          0.736
Psed_1479
3-oxoacyl-ACP reductase (251 aa)
 
          0.684
Psed_3724
3-oxoacyl-ACP reductase (257 aa)
 
          0.675
Psed_0219
3-oxoacyl-ACP reductase (244 aa)
   
          0.669
Psed_2113
Short-chain dehydrogenase/reductase SDR (235 aa)
 
          0.629
Psed_2249
NADPH-quinone reductase (313 aa)
              0.575
Psed_2253
Short-chain dehydrogenase/reductase SDR (254 aa)
 
       
0.499
Psed_3673
Xylulokinase (494 aa)
         
  0.488
Psed_1103
Xylulokinase (468 aa)
         
  0.488
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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