STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2360Xanthine dehydrogenase; KEGG: sen:SACE_4618 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead. (728 aa)    
Predicted Functional Partners:
Psed_2359
Xanthine dehydrogenase; KEGG: amd:AMED_3040 carbon-monoxide dehydrogenase medium subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding.
 0.996
Psed_2358
(2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: amd:AMED_3041 carbon-monoxide dehydrogenase small subunit.
 
 0.974
Psed_2560
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.973
Psed_6475
Carbon-monoxide dehydrogenase (acceptor); KEGG: tro:trd_A0776 carbon monoxide dehydrogenase small chain (CO dehydrogenase subunit S) (CO-DH S); PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.967
Psed_6215
Carbon-monoxide dehydrogenase (acceptor); KEGG: cwo:Cwoe_4105 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.945
Psed_2251
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.942
Psed_2499
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.931
Psed_6471
Xanthine dehydrogenase; KEGG: cai:Caci_4735 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.931
Psed_1766
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
 0.909
Psed_5676
Carbon-monoxide dehydrogenase (acceptor); KEGG: svi:Svir_13110 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.907
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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